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Software that works with freq file extension

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FREQ file extension - SAM frequency model file

What is freq file? How to open freq files?

File type specification:

Various data file type icon Various data file type

The FREQ file extension is associated with SAM (Sequence Alignment and Modeling system).

The .freq files contain frequency model generated by buildmodel when the many_files parameter is set. This is a model that reports the frequency of each letter in each state when the training set is evaluated according to the model.

The default software associated to freq file type:

Sequence Alignment and Modeling system  Linux/Unix software

Company or developer:
  Richard Hughey - Kevin Karplus - Anders Krogh

The Sequence Alignment and Modeling system (SAM) is a collection of fsoftware tools for creating, refining, and using linear hidden Markov models for biological sequence analysis.

The model states can be viewed as representing the sequence of columns in a multiple sequence alignment, with provisions for arbitrary position-dependent insertions and deletions in each sequence. The models are trained on a family of protein or nucleic acid sequences using an expectation-maximization algorithm and a variety of algorithmic heuristics. A trained model can then be used to both generate multiple alignments and search databases for new members of the family.

Help how to open FREQ files:

Due the variability and uncertainty of this file type group, there is no general information available, about how to open this various data file format. However most files with extension from this group are usually not meant to be opened or viewed directly. If there are associated applications or programs listed below the extension description, you can always try to check their website for additional informations on their forums or other type of customer support.

For general information try to look at:
Identifying unknown file formats

How to convert file with extension FREQ:

Due the variability and uncertainty of this file type group, there is no general information available, about how to convert this various data file format. However most files with extension from this group are usually not in formats, which can be converted. If there are associated applications or programs listed below the extension description, you can always try to check their website for additional informations on their forums or other type of customer support.

List of software applications associated to the .freq file extension

Recommended software programs are sorted by OS platform (Windows, Mac OS X etc.) and possible program actions
that can be done with the file
: like open freq file, edit freq file, convert freq file, view freq file, play freq file etc. (if exist software for corresponding action in File-Extensions.org's database).

Hint:
Click on the tab below to simply browse between the application actions, to quickly get a list of recommended software, which is able to perform the specified software action, such as opening, editing or converting of the freq files.

  • Create freq file
  • Others freq file

Programs that can create freq file - SAM frequency model file

Click on the link to get more information about Sequence Alignment and Modeling system for create freq file action.

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