Detailed description

Software that works with hmmer file extension

Add comment

Bookmark & share this page with others:

HMMER file extension - SAM HMMER format file

What is hmmer file? How to open hmmer files?

File type specification:

Various data file type icon Various data file type

The HMMER file extension is related to Sequence Alignment and Modeling system (SAM). A *.hmmer file contains data in HMMER file format.

The default software associated to hmmer file type:

Sequence Alignment and Modeling system  Linux/Unix software

Company or developer:
  Richard Hughey - Kevin Karplus - Anders Krogh

The Sequence Alignment and Modeling system (SAM) is a collection of fsoftware tools for creating, refining, and using linear hidden Markov models for biological sequence analysis.

The model states can be viewed as representing the sequence of columns in a multiple sequence alignment, with provisions for arbitrary position-dependent insertions and deletions in each sequence. The models are trained on a family of protein or nucleic acid sequences using an expectation-maximization algorithm and a variety of algorithmic heuristics. A trained model can then be used to both generate multiple alignments and search databases for new members of the family.

Help how to open HMMER files:

Due the variability and uncertainty of this file type group, there is no general information available, about how to open this various data file format. However most files with extension from this group are usually not meant to be opened or viewed directly. If there are associated applications or programs listed below the extension description, you can always try to check their website for additional informations on their forums or other type of customer support.

For general information try to look at:
Identifying unknown file formats

How to convert file with extension HMMER:

Due the variability and uncertainty of this file type group, there is no general information available, about how to convert this various data file format. However most files with extension from this group are usually not in formats, which can be converted. If there are associated applications or programs listed below the extension description, you can always try to check their website for additional informations on their forums or other type of customer support.

List of software applications associated to the .hmmer file extension

Recommended software programs are sorted by OS platform (Windows, Mac OS X etc.) and possible program actions
that can be done with the file
: like open hmmer file, edit hmmer file, convert hmmer file, view hmmer file, play hmmer file etc. (if exist software for corresponding action in File-Extensions.org's database).

Hint:
Click on the tab below to simply browse between the application actions, to quickly get a list of recommended software, which is able to perform the specified software action, such as opening, editing or converting of the hmmer files.

  • Open hmmer file
  • Save hmmer file
  • Edit hmmer file
  • Create hmmer file

Software that open hmmer file - SAM HMMER format file

Click on the link to get more information about Sequence Alignment and Modeling system for open hmmer file action.

Previous file extension
HMM file extension

File-Extensions.org > Various data file types

Next file extension
file extension HMMR

 

Follow us!

Enter any file extension without dot (e.g. pdf)
Search for file extension details and associated application(s)

RSS feed