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Found 2 file extension associations related to NimbleGen and 2 file formats developed specifically for use with NimbleGen.

Platform, operating system:  Microsoft Windows icon Microsoft Windows

Go to: NimbleGen description

Developer: Roche NimbleGen, Inc.

Roche NimbleGen software list & details

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Roche NimbleGen, Inc. logoNimbleGen

Developer / company: Roche NimbleGen

Roche NimbleGen has developed a suite of software tools to facilitate the data pipeline from array design to image extraction and analysis to the graphical display and browsing of large datasets. The software has been designed with the objectives of ease of use, easy to understand graphical interfaces and conformance to industry standard file formats for large genomic datasets.

For NimbleGen applications where data is mapped to genomic tracks, the SignalMap browser provides a simple browsing interface. Data in GFF file formats can be readily imported and analyzed with no limitations on the number of datapoints. When imported annotation files contain embedded URL information, clicking on genomic features such as genes launches your web browser and directs you to the associated public database information for that gene.

For high-volume users, NimbleScan software can give you your own array data pipeline. Input array images and NimbleScan can automatically place an accurately aligned grid and extract data from 1 or 2 color images. Advanced reporting capabilities provide application-specific analysis of CGH, Expression, Microbial Resequencing and ChIP-chip array datasets for easy interpretation of experimental results.

NimbleGen works with the following file extensions:

Note: You can click on any file extension link from the list below, to view its detailed information. The list of extensions used or otherwise associated with the application may not be complete, because many common file extensions on our website, such as jpg (pictures) or txt (text files), can be opened by a large number of applications, or are too general file format. However most, if not all directly associated file extensions should be listed with its appropriate program. Although its likely, that some file extensions may be missing from the list of associated file extensions with the application, yet they can be opened, be part of, or otherwise be associated with the program.

NimbleGen default file extension associations

gff file icon.gffngd file icon.ngd

Comparison table of actions that NimbleGen can perform with each of its associated file type beta

This table might not contain all possible associated or supported file types or may contain incorrect data.
If you need more information please contact the developers of NimbleGen (Roche NimbleGen, Inc.), or check out their product website.

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