STOCKHOLM file extension. How to open and convert files with STOCKHOLM file suffix

Files with stockholm extension are data files with specific DNA/RNA protein sequenece content.

Software that open stockholm file

STOCKHOLM file extension - Stockholm bio informatics format

What is stockholm file? How to open stockholm files?

File type specification:

File extension stockholm is used for a multiple sequence alignment format used by Pfam, Rfam and Dfam, to disseminate protein, RNA and DNA sequence alignments.

Stockholm format files may also feature .sto or .stk instead.

The format is plain text and is designed to be both human-readable and machine-readable. It includes features for representing sequence annotations, secondary structure, and other information that can be associated with a multiple sequence alignment. Each file in Stockholm format begins with a line containing the string "# STOCKHOLM 1.0", and ends with a line containing only "//".

Updated: February 21, 2024

Help how to open:

Due the variability and uncertainty of this file type group, there is no general information available, about how to open this various data file format. However most files with extension from this group are usually not meant to be opened or viewed directly. If there are associated applications or programs listed below the extension description, you can always try to check their website for additional informations on their forums or other type of customer support.

For general information try to look at:
Identifying unknown file formats

How to convert:

Due the variability and uncertainty of this file type group, there is no general information available, about how to convert this various data file format. However most files with extension from this group are usually not in formats, which can be converted. If there are associated applications or programs listed below the extension description, you can always try to check their website for additional informations on their forums or other type of customer support.

List of recommended software applications associated to the .stockholm file extension

Recommended software programs are sorted by OS platform (Windows, macOS, Linux, iOS, Android etc.)
and possible program actions that can be done with the file: like open stockholm file, edit stockholm file, convert stockholm file, view stockholm file, play stockholm file etc. (if exist software for corresponding action in File-Extensions.org's database).

Software that import stockholm file - Stockholm bio informatics format

Programs supporting the exension stockholm on the main platforms Windows, Mac, Linux or mobile. Click on the link to get more information about SnapGene for import stockholm file action.

Multiplatform:

SnapGene

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STOCKHOLM file extension